- Transcriptional heterogeneity and lineage commitment in myeloid progenitors
- Data Analysis 2014
- Course on genome evolution
- Evolutionary Dynamics of CpG Islands
- Corrected human Lymphoblast Hi-C contact maps
- Drosophila Hi-C contact maps
- 4C-Seq pipeline
- Deep bisulfite sequencing
- Conserved elements in flies
- Mouse single cell RNA-seq (Cd11c+)
- Single cell Hi-C Pipeline (scell_hicpipe)
- The mutation spectrum in genomic replication domains
- MARS-seq2.0
- C-walk and 3way-4C distribution.
- UMI-4C package
- Cnidarian cell type diversity revealed by whole-organism single-cell RNA-seq analysis
- Early metazoan cell type diversity and the evolution of multicellular gene regulation
- schic2: sequence processing and analysis of single-cell Hi-C datasets (July 2017)