Amos Tanay's Group

Epigenomics and evolution
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Resources

  • Transcriptional heterogeneity and lineage commitment in myeloid progenitors
  • Data Analysis 2014
  • Course on genome evolution
  • Evolutionary Dynamics of CpG Islands
  • Corrected human Lymphoblast Hi-C contact maps
  • Drosophila Hi-C contact maps
  • 4C-Seq pipeline
  • Deep bisulfite sequencing
  • Conserved elements in flies
  • Mouse single cell RNA-seq (Cd11c+)
  • Single cell Hi-C Pipeline (scell_hicpipe)
  • The mutation spectrum in genomic replication domains
  • MARS-seq2.0
  • C-walk and 3way-4C distribution.
  • UMI-4C package
  • Cnidarian cell type diversity revealed by whole-organism single-cell RNA-seq analysis
  • Early metazoan cell type diversity and the evolution of multicellular gene regulation
  • schic2: sequence processing and analysis of single-cell Hi-C datasets (July 2017)
  • Dysfunctional CD8+ T cells form a proliferative, dynamically regulated compartment within human melanoma (Li et al, Cell 2018)
  • Recent Posts

    • Published: DNA methylation turnover and epigenetic memory
    • Single cell RNA-seq published
    • Hi-C map of Drosophila is published
    • Paper on Hi-C contact map normalization published in Nature Genetics
    • Evolutionary origins of CpG islands paper published in Cell
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